Submitted by olange on Fri, 05/18/2012 - 12:58
Description:
renumber residues in chemical shift file
Usage:
| renumber_prot.py |
[-h] [-s START] [-e END] |
| |
[-correct_fasta CORRECT_FASTA] |
| |
[-fasta FASTA | -rigid RIGID] [-traceback] |
| |
infile [outfile] |
Detailed Help:
| outfile |
chemical shift file |
| infile |
chemical shift file |
| -h, --help |
show this help message and exit |
| -s START, --start START |
starting residue |
| -e END, --end END |
ending residue |
| -correct_fasta CORRECT_FASTA |
if there is no sequence information in the .prot file, you can supply sequence with this flag |
| -fasta FASTA |
figure out trimming from given sequence |
| -rigid RIGID |
use first and last rigid residue from .rigid file as written by pred2rigid |
| -traceback |
print full traceback in case of error |