rasrec

iterative Rosetta protocol that combines abrelax, beta-strand jumping and resampling techniques

Structure annotation for rasrec and abrelax

zak's picture
Submitted by zak on Mon, 04/08/2013 - 16:10

For structure annotation, we have to run annotate_target and it shows us weak/strong of the structures. This tutorial explaints how to annotate structures calculated by

Calculations with Restraints

Submitted by olange on Sat, 06/09/2012 - 13:19

This tutorial explains how to add restraints from RDC and NOE data to your

RASREC CS-Rosetta

Submitted by olange on Wed, 04/25/2012 - 18:49

This tutorial shows how to run RASREC CS-Rosetta calculations as published in References [1][2] and [3] but without any additional restraints than backbone chemical shift data.

Fragment Picking with Chemical Shift Data

zak's picture
Submitted by zak on Wed, 04/25/2012 - 18:46

1. Preparation of Input Files:

RASREC Rosetta

Submitted by olange on Sat, 04/21/2012 - 09:55

This chapter describes the RASREC protocol as described in Refs. [1][2].

Loop Closing

Submitted by olange on Sat, 04/21/2012 - 09:25

Loop Closing is related to, but not identical with, Loop Modeling protocols. Loop Closing is dedicated to close a non-physical

Relax

Submitted by olange on Sat, 04/21/2012 - 09:24

Relax is the main protocol for simple all-atom refinement of structures in the ROSETTA force-field. Relax does not do extensive refinement and only searches the local conformational space around the starting structure.

Subscribe to RSS - rasrec